R Data Concatenation: Base R vs Alternatives Using data.table and dplyr

Concatenating Data Based on a Certain Sequence

In this article, we will explore how to concatenate data based on a certain sequence. We’ll discuss the problem, propose solutions using Base R, and compare them with alternative approaches.

Problem Statement

We are given a dataset x that contains day and time columns. Additionally, we have a vector df containing 1000 randomly selected values from sequences of variable days (1-232). Our goal is to create a new dataset that sorts based on the sequence. Specifically, we want to extract rows from the original dataset based on each value in the df vector, starting from the first occurrence and continuing until we reach the end of the sequence.

Solution Using Base R

One approach to solving this problem is by using the do.call function along with the rbind.data.frame method. Here’s an example code snippet that demonstrates how to achieve this:

x <- structure(list(day = c(1L, 1L, 2L, 2L, 3L, 3L, 4L, 4L), time = c(2L,
2L, 2L, 3L, 4L, 5L, 4L, 2L)), class = "data.frame", row.names = c(NA,
-8L))
df <- c(3,4,1,2,4,1,3)

result <- do.call("rbind.data.frame", lapply(df, function(i) subset(x, day == i)))

In this code snippet, do.call is used to apply the rbind.data.frame method to each value in the df vector. The resulting data frames are then combined using the rbind function.

However, we should note that the use of do.call("rbind.data.frame", ...) can lead to issues with data frame instantiation, particularly when dealing with columns of type character. To avoid these issues, you may want to add an additional argument to specify how to handle character columns:

result <- do.call("rbind.data.frame", c(lapply(df, function(i) subset(x, day == i)), stringsAsFactors = FALSE))

Alternatively, you can use data.table::rbindlist or dplyr::bind_rows to achieve the same result.

Alternative Approaches

Using data.table::rbindlist

Here’s an example code snippet that demonstrates how to use data.table::rbindlist:

library(data.table)
x <- structure(list(day = c(1L, 1L, 2L, 2L, 3L, 3L, 4L, 4L), time = c(2L,
2L, 2L, 3L, 4L, 5L, 4L, 2L)), class = "data.frame", row.names = c(NA,
-8L))
df <- c(3,4,1,2,4,1,3)

result <- rbindlist(lapply(df, function(i) subset(x, day == i)))

In this code snippet, rbindlist is used to combine the data frames created using subset. This approach avoids issues with data frame instantiation and provides a more efficient solution.

Using dplyr::bind_rows

Here’s an example code snippet that demonstrates how to use dplyr::bind_rows:

library(dplyr)
x <- structure(list(day = c(1L, 1L, 2L, 2L, 3L, 3L, 4L, 4L), time = c(2L,
2L, 2L, 3L, 4L, 5L, 4L, 2L)), class = "data.frame", row.names = c(NA,
-8L))
df <- c(3,4,1,2,4,1,3)

result <- bind_rows(lapply(df, function(i) subset(x, day == i)))

In this code snippet, bind_rows is used to combine the data frames created using subset. This approach provides a more efficient solution than do.call("rbind.data.frame", ...), especially when dealing with large datasets.

Conclusion

Concatenating data based on a certain sequence can be achieved using various approaches. The solution presented in this article uses Base R’s do.call function along with the rbind.data.frame method, but alternative approaches using data.table::rbindlist and dplyr::bind_rows provide more efficient solutions.

When working with large datasets or dealing with columns of type character, it is essential to consider how to handle these cases properly. By adding an additional argument to specify how to handle character columns, you can avoid issues with data frame instantiation.

In conclusion, the choice of approach ultimately depends on your specific use case and personal preference. However, by understanding the different options available, you can make informed decisions when working with data concatenation problems.


Last modified on 2023-07-08